Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 GAPDHP21-201ENST00000450301 1010 ntBASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 AL512361.1-201ENST00000554200 418 ntBASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 AC097376.2-205ENST00000610159 5334 ntBASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX49Q9Y6V7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
DDX49Q9Y6V7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 MEIS3P1-201ENST00000495167 958 ntBASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 AL596325.1-201ENST00000563991 1082 ntBASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 AC004233.3-201ENST00000607794 1269 ntBASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 AL589702.1-201ENST00000641229 1509 ntBASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
DDX49Q9Y6V7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 AC087499.5-201ENST00000452760 1342 ntBASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms