Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 AL512430.1-201ENST00000392575 860 ntBASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 AC026803.1-201ENST00000569130 274 ntBASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 AC008805.1-201ENST00000590892 364 ntBASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 AC002472.3-201ENST00000640124 621 ntBASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 AC018695.7-201ENST00000624587 2492 ntBASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 AC239868.1-201ENST00000369385 493 ntBASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 RN7SL258P-201ENST00000478664 300 ntBASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 DUX4L46-201ENST00000566845 751 ntBASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 RPL17P45-201ENST00000586289 509 ntBASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 AL109837.1-201ENST00000603272 613 ntBASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 AC148477.9-201ENST00000623974 539 ntBASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 AL161773.1-201ENST00000624845 863 ntBASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 SHC1P1-201ENST00000425230 1745 ntBASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCH2Q9Y6C5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 MIR6858-201ENST00000620733 67 ntBASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 AL132780.4-201ENST00000624870 1135 ntBASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 FAM90A2P-201ENST00000511144 1395 ntBASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 FAM90A25P-201ENST00000528404 1395 ntBASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 MTHFR-217ENST00000641820 1569 ntBASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCH2Q9Y6C5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms