Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 MST1L-201ENST00000442552 2185 ntBASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.57■□□□□ 0.08
RAI2Q9Y5P3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 AC104640.1-201ENST00000562617 2109 ntBASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 GHSR-202ENST00000427970 912 ntBASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 TTTY23B-201ENST00000442790 549 ntBASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 MIR6775-201ENST00000617557 69 ntBASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 COX11-210ENST00000639671 696 ntBASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 AL033527.5-201ENST00000641382 801 ntBASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 KRT8P22-201ENST00000562317 1415 ntBASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 AC006486.2-201ENST00000624246 2199 ntBASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI2Q9Y5P3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI2Q9Y5P3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms