Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGA9Q9Y5G4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
PCDHGA9Q9Y5G4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
PCDHGA9Q9Y5G4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 AL121723.1-201ENST00000445194 1519 ntBASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 REXO1L8P-201ENST00000604378 1897 ntBASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGA9Q9Y5G4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 MSTO2P-201ENST00000314835 1709 ntBASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 MIR1247-201ENST00000408206 136 ntBASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 GPAA1P2-201ENST00000417923 928 ntBASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 CNN2P8-201ENST00000421872 913 ntBASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 AC026954.1-201ENST00000429771 1293 ntBASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 AC243960.2-201ENST00000600996 747 ntBASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 AC244669.2-201ENST00000612320 853 ntBASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PCDHGA9Q9Y5G4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms