Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00588Q9Y4M8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 PKD1P5-201ENST00000532415 10291 ntBASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 NME2-201ENST00000393183 568 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 AL139094.1-201ENST00000405549 1188 ntBASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 FAM21FP-201ENST00000426241 1131 ntBASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 FAM197Y7-201ENST00000432892 766 ntBASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 AL033527.4-201ENST00000641026 673 ntBASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 AL138709.1-201ENST00000614840 1693 ntBASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LINC00588Q9Y4M8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 271.5 ms