Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.21□□□□□ -0.13
RPH3AQ9Y2J0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.21□□□□□ -0.13
RPH3AQ9Y2J0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.21□□□□□ -0.13
RPH3AQ9Y2J0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.21□□□□□ -0.13
RPH3AQ9Y2J0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPH3AQ9Y2J0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.21□□□□□ -0.13
RPH3AQ9Y2J0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.21□□□□□ -0.14
RPH3AQ9Y2J0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RPH3AQ9Y2J0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RPH3AQ9Y2J0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RPH3AQ9Y2J0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.21□□□□□ -0.14
RPH3AQ9Y2J0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.21□□□□□ -0.14
RPH3AQ9Y2J0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RPH3AQ9Y2J0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.21□□□□□ -0.14
RPH3AQ9Y2J0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RPH3AQ9Y2J0 AC020658.6-201ENST00000623564 1870 ntBASIC14.21□□□□□ -0.14
RPH3AQ9Y2J0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RPH3AQ9Y2J0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 AC138969.3-201ENST00000546612 1459 ntBASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 AC138932.2-201ENST00000548268 1459 ntBASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 AC126755.4-201ENST00000549796 1459 ntBASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 TOMM22P5-201ENST00000416399 439 ntBASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 RPS2P32-201ENST00000439199 892 ntBASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 WASH4P-201ENST00000564273 1246 ntBASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 TP53TG3HP-202ENST00000569755 579 ntBASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 MIR8072-201ENST00000614241 80 ntBASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 AL121723.1-201ENST00000445194 1519 ntBASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 AC127383.1-201ENST00000444697 1800 ntBASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
RPH3AQ9Y2J0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 AC099063.4-201ENST00000641099 1602 ntBASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 AC009090.5-201ENST00000624886 2285 ntBASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 AC098850.1-201ENST00000419919 790 ntBASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 RN7SL399P-201ENST00000471648 279 ntBASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 AC093726.1-201ENST00000608064 963 ntBASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms