Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 AL033527.5-201ENST00000641382 801 ntBASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 AC105233.6-201ENST00000642093 218 ntBASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 AL158070.2-201ENST00000623713 1621 ntBASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 TNRC18P2-201ENST00000417666 2714 ntBASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 CICP14-201ENST00000629111 2732 ntBASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 AP006294.1-201ENST00000415407 339 ntBASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 CLUHP6-201ENST00000580789 941 ntBASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 CU634019.7-201ENST00000624153 1185 ntBASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 FP236241.2-201ENST00000624906 1185 ntBASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DTX4Q9Y2E6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms