Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 MBLAC2-202ENST00000514906 1936 ntBASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 CICP17-201ENST00000418553 2377 ntBASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 RPS8P6-201ENST00000426177 609 ntBASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 AC093520.2-201ENST00000561830 333 ntBASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 HSPA7-201ENST00000445535 1927 ntBASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 AC126365.1-201ENST00000578585 1514 ntBASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HHLA3Q9XRX5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.59
HHLA3Q9XRX5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.59
HHLA3Q9XRX5 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.33□□□□□ -0.59
HHLA3Q9XRX5 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 SPDYE7P-202ENST00000420373 878 ntBASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms