Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 AC079316.1-201ENST00000548397 411 ntBASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 AC148477.4-201ENST00000613430 1793 ntBASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 AL158070.2-201ENST00000623713 1621 ntBASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCF1Q9UBD9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.66□□□□□ -0.22
CLCF1Q9UBD9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 KRT8P14-201ENST00000414254 1442 ntBASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 AC067930.6-201ENST00000623257 4947 ntBASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 AC090616.6-203ENST00000579186 1945 ntBASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 FAM197Y7-201ENST00000432892 766 ntBASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.65□□□□□ -0.22
CLCF1Q9UBD9 RNA5SP412-201ENST00000516234 123 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms