Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AP006294.1-201ENST00000415407 339 ntBASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 AL109954.1-202ENST00000564051 2148 ntBASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 AL049840.4-201ENST00000602422 811 ntBASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 AC008494.3-201ENST00000606615 944 ntBASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 AC093726.1-201ENST00000608064 963 ntBASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 AL391825.1-201ENST00000457671 1364 ntBASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 TCAF2P1-201ENST00000291129 2421 ntBASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CUEDC1Q9NWM3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 AP002414.2-201ENST00000591780 3365 ntBASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 RPL5P21-201ENST00000404620 815 ntBASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 AL512384.1-201ENST00000406683 331 ntBASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 AC087499.6-201ENST00000411576 835 ntBASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 VDAC1P7-201ENST00000462417 847 ntBASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 KRT8P44-201ENST00000441609 1350 ntBASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 AC023024.2-201ENST00000623561 1993 ntBASIC14.93□□□□□ -0.02
CUEDC1Q9NWM3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms