Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.22■□□□□ 0.19
TLR9Q9NR96 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.22■□□□□ 0.19
TLR9Q9NR96 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.22■□□□□ 0.19
TLR9Q9NR96 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TLR9Q9NR96 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TLR9Q9NR96 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
TLR9Q9NR96 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR9Q9NR96 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TLR9Q9NR96 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.22■□□□□ 0.19
TLR9Q9NR96 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.22■□□□□ 0.19
TLR9Q9NR96 AL603764.1-201ENST00000636452 321 ntBASIC16.22■□□□□ 0.19
TLR9Q9NR96 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TLR9Q9NR96 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR9Q9NR96 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR9Q9NR96 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.22■□□□□ 0.19
TLR9Q9NR96 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR9Q9NR96 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR9Q9NR96 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR9Q9NR96 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.21■□□□□ 0.19
TLR9Q9NR96 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TLR9Q9NR96 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR9Q9NR96 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR9Q9NR96 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR9Q9NR96 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TLR9Q9NR96 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TLR9Q9NR96 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TLR9Q9NR96 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.21■□□□□ 0.19
TLR9Q9NR96 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.21■□□□□ 0.19
TLR9Q9NR96 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR9Q9NR96 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TLR9Q9NR96 AP003171.2-201ENST00000528208 925 ntBASIC16.21■□□□□ 0.19
TLR9Q9NR96 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.21■□□□□ 0.19
TLR9Q9NR96 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.21■□□□□ 0.19
TLR9Q9NR96 AC106820.3-201ENST00000561653 397 ntBASIC16.21■□□□□ 0.19
TLR9Q9NR96 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.21■□□□□ 0.19
TLR9Q9NR96 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR9Q9NR96 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR9Q9NR96 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TLR9Q9NR96 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TLR9Q9NR96 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TLR9Q9NR96 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.21■□□□□ 0.19
TLR9Q9NR96 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TLR9Q9NR96 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.21■□□□□ 0.18
TLR9Q9NR96 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.21■□□□□ 0.18
TLR9Q9NR96 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TLR9Q9NR96 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.21■□□□□ 0.18
TLR9Q9NR96 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.21■□□□□ 0.18
TLR9Q9NR96 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 TUBBP5-203ENST00000508529 1334 ntBASIC16.2■□□□□ 0.18
TLR9Q9NR96 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 AC104457.1-201ENST00000401024 814 ntBASIC16.2■□□□□ 0.18
TLR9Q9NR96 AL136309.1-201ENST00000403917 691 ntBASIC16.2■□□□□ 0.18
TLR9Q9NR96 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 CHMP1AP1-201ENST00000445563 662 ntBASIC16.2■□□□□ 0.18
TLR9Q9NR96 MAGEA5-201ENST00000446757 942 ntBASIC16.2■□□□□ 0.18
TLR9Q9NR96 AC021723.1-201ENST00000486306 515 ntBASIC16.2■□□□□ 0.18
TLR9Q9NR96 AC100850.1-201ENST00000506768 649 ntBASIC16.2■□□□□ 0.18
TLR9Q9NR96 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 SAMD11P1-201ENST00000571429 661 ntBASIC16.2■□□□□ 0.18
TLR9Q9NR96 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.2■□□□□ 0.18
TLR9Q9NR96 AL023803.2-201ENST00000620080 638 ntBASIC16.2■□□□□ 0.18
TLR9Q9NR96 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 AC084364.1-201ENST00000551967 1556 ntBASIC16.2■□□□□ 0.18
TLR9Q9NR96 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR9Q9NR96 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR9Q9NR96 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms