Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 AP001063.1-201ENST00000568332 529 ntBASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 MIR5189-201ENST00000577370 114 ntBASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 CLUHP6-201ENST00000580789 941 ntBASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 BX539320.1-201ENST00000623759 877 ntBASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP13A1Q9HD20 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 ACTG1P3-201ENST00000431775 1114 ntBASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 AC009486.1-201ENST00000569860 813 ntBASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 AC015936.2-201ENST00000593177 259 ntBASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 AC144831.1-201ENST00000573312 2656 ntBASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
ATP13A1Q9HD20 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 AC006058.4-201ENST00000624016 1670 ntBASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP13A1Q9HD20 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms