Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRMS1Q9HCU9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 DBET-201ENST00000630918 3363 ntBASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 AL391069.4-201ENST00000609583 481 ntBASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 OR2I1P-210ENST00000642037 4691 ntBASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.81■□□□□ 0.44
BRMS1Q9HCU9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 WASH3P-207ENST00000560956 1394 ntBASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 AC055876.2-201ENST00000531834 546 ntBASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 AC023310.3-201ENST00000557027 670 ntBASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 AC100756.1-201ENST00000562736 682 ntBASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 RRP7BP-205ENST00000566851 833 ntBASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 AC138749.3-201ENST00000567691 622 ntBASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 AC116165.1-201ENST00000611806 668 ntBASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 CLK3P2-201ENST00000427566 1453 ntBASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRMS1Q9HCU9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms