Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC138969.3-201ENST00000546612 1459 ntBASIC15.27■□□□□ 0.03
TRIM54Q9BYV2 AC138932.2-201ENST00000548268 1459 ntBASIC15.27■□□□□ 0.03
TRIM54Q9BYV2 AC126755.4-201ENST00000549796 1459 ntBASIC15.27■□□□□ 0.03
TRIM54Q9BYV2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.27■□□□□ 0.03
TRIM54Q9BYV2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM54Q9BYV2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 KRT18P43-201ENST00000469825 1281 ntBASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 DUX4L27-201ENST00000554796 1261 ntBASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 AC044860.1-202ENST00000559481 777 ntBASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 CICP23-201ENST00000605013 2741 ntBASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 AC106881.1-201ENST00000605849 3329 ntBASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 BTBD7P1-201ENST00000447253 1453 ntBASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM54Q9BYV2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 AC091951.1-201ENST00000512854 2465 ntBASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 AC055876.3-201ENST00000431496 288 ntBASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 LINC01115-203ENST00000606068 577 ntBASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 AC138649.4-201ENST00000612222 287 ntBASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM54Q9BYV2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms