Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SSBP3Q9BWW4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
SSBP3Q9BWW4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.9□□□□□ -0.35
SSBP3Q9BWW4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SSBP3Q9BWW4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SSBP3Q9BWW4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 U91328.1-201ENST00000437528 223 ntBASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 AC244107.1-201ENST00000442033 332 ntBASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 AC093813.1-201ENST00000605066 256 ntBASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP3Q9BWW4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 AC026410.3-201ENST00000514280 936 ntBASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 TDH-203ENST00000531764 1110 ntBASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 AC106886.1-201ENST00000568660 600 ntBASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 AC008735.3-201ENST00000596646 500 ntBASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 AC107373.2-201ENST00000607735 490 ntBASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 AL162274.1-201ENST00000617191 1098 ntBASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms