Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 AC016694.1-201ENST00000434179 700 ntBASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 AC093813.1-201ENST00000605066 256 ntBASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 DRD5P1-201ENST00000456605 1438 ntBASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPAP1Q9BWH6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 AC023024.2-201ENST00000623561 1993 ntBASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPAP1Q9BWH6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 ACKR1-201ENST00000368121 1240 ntBASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 AC108725.1-201ENST00000495472 409 ntBASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 AC008687.7-202ENST00000637404 953 ntBASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms