Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX18Q96RF0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SNX18Q96RF0 AL023775.1-201ENST00000454907 1746 ntBASIC14.12□□□□□ -0.15
SNX18Q96RF0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 MIR770-201ENST00000390219 98 ntBASIC14.12□□□□□ -0.15
SNX18Q96RF0 FO393414.2-201ENST00000405153 598 ntBASIC14.12□□□□□ -0.15
SNX18Q96RF0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 SPDYE17-201ENST00000412399 783 ntBASIC14.12□□□□□ -0.15
SNX18Q96RF0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 AC025678.2-201ENST00000562061 970 ntBASIC14.12□□□□□ -0.15
SNX18Q96RF0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 AC093512.1-201ENST00000617969 520 ntBASIC14.12□□□□□ -0.15
SNX18Q96RF0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 TCAF1P1-201ENST00000414990 2232 ntBASIC14.12□□□□□ -0.15
SNX18Q96RF0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 SBF1P1-201ENST00000444527 5631 ntBASIC14.12□□□□□ -0.15
SNX18Q96RF0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX18Q96RF0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
SNX18Q96RF0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 AC011467.4-201ENST00000594891 528 ntBASIC14.11□□□□□ -0.15
SNX18Q96RF0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 LINC00628-201ENST00000628516 1289 ntBASIC14.11□□□□□ -0.15
SNX18Q96RF0 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 AC027612.1-201ENST00000445234 2395 ntBASIC14.11□□□□□ -0.15
SNX18Q96RF0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SNX18Q96RF0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNX18Q96RF0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms