Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 AGAP7P-201ENST00000582299 2062 ntBASIC12.77□□□□□ -0.36
GAFA1Q96PS6 AGAP14-201ENST00000624701 2060 ntBASIC12.77□□□□□ -0.36
GAFA1Q96PS6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.77□□□□□ -0.36
GAFA1Q96PS6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
GAFA1Q96PS6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 RN7SL752P-201ENST00000463779 287 ntBASIC12.77□□□□□ -0.37
GAFA1Q96PS6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 AL596325.1-201ENST00000563991 1082 ntBASIC12.77□□□□□ -0.37
GAFA1Q96PS6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 CLUHP6-201ENST00000580789 941 ntBASIC12.77□□□□□ -0.37
GAFA1Q96PS6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
GAFA1Q96PS6 DBET-201ENST00000630918 3363 ntBASIC12.77□□□□□ -0.37
GAFA1Q96PS6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms