Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 PPT1-215ENST00000641471 2368 ntBASIC15.85■□□□□ 0.13
RPRD1AQ96P16 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 AC007787.1-201ENST00000588095 1583 ntBASIC15.85■□□□□ 0.13
RPRD1AQ96P16 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 AC093433.1-201ENST00000458048 571 ntBASIC15.85■□□□□ 0.13
RPRD1AQ96P16 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 AC073347.1-201ENST00000421633 2643 ntBASIC15.85■□□□□ 0.13
RPRD1AQ96P16 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 AC148477.4-201ENST00000613430 1793 ntBASIC15.85■□□□□ 0.13
RPRD1AQ96P16 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 AC068587.3-201ENST00000526613 355 ntBASIC15.84■□□□□ 0.13
RPRD1AQ96P16 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 AC093525.8-201ENST00000624099 1342 ntBASIC15.84■□□□□ 0.13
RPRD1AQ96P16 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPRD1AQ96P16 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPRD1AQ96P16 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RPRD1AQ96P16 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPRD1AQ96P16 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.83■□□□□ 0.13
RPRD1AQ96P16 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPRD1AQ96P16 MSTO2P-201ENST00000314835 1709 ntBASIC15.83■□□□□ 0.13
RPRD1AQ96P16 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms