Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.71■□□□□ 0.42
CDCA5Q96FF9 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 AC080080.1-201ENST00000625121 2420 ntBASIC17.7■□□□□ 0.42
CDCA5Q96FF9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 AC234644.1-201ENST00000406065 370 ntBASIC17.7■□□□□ 0.42
CDCA5Q96FF9 AC026320.2-201ENST00000434379 478 ntBASIC17.7■□□□□ 0.42
CDCA5Q96FF9 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 LINC02447-202ENST00000501888 2146 ntBASIC17.7■□□□□ 0.42
CDCA5Q96FF9 AC008723.1-201ENST00000506922 207 ntBASIC17.7■□□□□ 0.42
CDCA5Q96FF9 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 RBM8B-201ENST00000555532 525 ntBASIC17.7■□□□□ 0.42
CDCA5Q96FF9 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA5Q96FF9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 RN7SKP230-201ENST00000365642 335 ntBASIC17.69■□□□□ 0.42
CDCA5Q96FF9 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 RPL17P45-201ENST00000586289 509 ntBASIC17.69■□□□□ 0.42
CDCA5Q96FF9 AL157813.1-201ENST00000612996 587 ntBASIC17.69■□□□□ 0.42
CDCA5Q96FF9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 TNRC18P3-201ENST00000441896 2691 ntBASIC17.69■□□□□ 0.42
CDCA5Q96FF9 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDCA5Q96FF9 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 AC006058.4-201ENST00000624016 1670 ntBASIC17.68■□□□□ 0.42
CDCA5Q96FF9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 MIR1227-201ENST00000408484 88 ntBASIC17.68■□□□□ 0.42
CDCA5Q96FF9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 PIN4P1-201ENST00000451079 396 ntBASIC17.68■□□□□ 0.42
CDCA5Q96FF9 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 AC141586.1-203ENST00000567242 366 ntBASIC17.68■□□□□ 0.42
CDCA5Q96FF9 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 AC005357.2-202ENST00000590507 1060 ntBASIC17.68■□□□□ 0.42
CDCA5Q96FF9 AC009884.2-201ENST00000603110 324 ntBASIC17.68■□□□□ 0.42
CDCA5Q96FF9 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 AC127024.7-201ENST00000625101 200 ntBASIC17.68■□□□□ 0.42
CDCA5Q96FF9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA5Q96FF9 MTHFR-217ENST00000641820 1569 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms