Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 AC126177.1-201ENST00000547829 2218 ntBASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 MIR1909-201ENST00000411312 80 ntBASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 AC016694.1-201ENST00000434179 700 ntBASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 AC007551.1-201ENST00000457394 519 ntBASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 AC022616.1-201ENST00000518688 554 ntBASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 AP000812.2-201ENST00000538934 718 ntBASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 PDIA3P1-201ENST00000471856 1510 ntBASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 AL359258.3-201ENST00000622910 2331 ntBASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 AC234783.1-201ENST00000441761 496 ntBASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 AC022210.1-201ENST00000449856 793 ntBASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 KRT90P-201ENST00000549264 1064 ntBASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 AC132938.4-201ENST00000623835 848 ntBASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ECHDC3Q96DC8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms