Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 GHSR-202ENST00000427970 912 ntBASIC16.28■□□□□ 0.2
UBA3Q8TBC4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 AP000845.1-201ENST00000581677 2131 ntBASIC16.28■□□□□ 0.2
UBA3Q8TBC4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.28■□□□□ 0.2
UBA3Q8TBC4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 RN7SL752P-201ENST00000463779 287 ntBASIC16.27■□□□□ 0.2
UBA3Q8TBC4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.27■□□□□ 0.2
UBA3Q8TBC4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBA3Q8TBC4 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.27■□□□□ 0.19
UBA3Q8TBC4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBA3Q8TBC4 REXO1L4P-201ENST00000605109 1937 ntBASIC16.27■□□□□ 0.19
UBA3Q8TBC4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UBA3Q8TBC4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.27■□□□□ 0.19
UBA3Q8TBC4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
UBA3Q8TBC4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.27■□□□□ 0.19
UBA3Q8TBC4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
UBA3Q8TBC4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBA3Q8TBC4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms