Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH19Q8TAB3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 AC026410.3-201ENST00000514280 936 ntBASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 SPDYE22P-201ENST00000582158 798 ntBASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 AC027307.3-201ENST00000594262 1100 ntBASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 MIR8072-201ENST00000614241 80 ntBASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH19Q8TAB3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 AL049840.4-201ENST00000602422 811 ntBASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms