Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 FAM45BP-202ENST00000592932 1624 ntBASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 AC026748.1-201ENST00000624349 3251 ntBASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 SNHG9-202ENST00000564014 471 ntBASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 AC025048.3-201ENST00000590609 569 ntBASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 AC005702.4-201ENST00000618393 416 ntBASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 AL033527.5-202ENST00000641632 1098 ntBASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.85□□□□□ -0.03
CLHC1Q8NHS4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 AC254562.1-201ENST00000417586 456 ntBASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 AC109322.1-201ENST00000524499 1264 ntBASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 LINC01115-203ENST00000606068 577 ntBASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 SPDYE12P-201ENST00000618416 771 ntBASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 AP000845.1-201ENST00000581677 2131 ntBASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLHC1Q8NHS4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms