Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 CELP-201ENST00000411440 1249 ntTSL 5 BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 AC004522.1-201ENST00000419978 654 ntBASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 AC108734.2-201ENST00000420887 1069 ntBASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 KRT18P46-201ENST00000435568 1279 ntBASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 AC093826.1-201ENST00000508655 993 ntBASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 FTLP5-201ENST00000586853 534 ntBASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.76
COL22A1Q8NFW1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 RN7SL494P-201ENST00000461517 304 ntBASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 RBM4-207ENST00000506523 654 ntTSL 3 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 SRP14-204ENST00000558720 780 ntTSL 2 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 ABHD17AP9-201ENST00000561925 548 ntBASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 RN7SL357P-201ENST00000581065 298 ntBASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 PTPN20CP-201ENST00000614090 920 ntBASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 AC112504.1-201ENST00000623415 1841 ntBASIC19.82■□□□□ 0.76
COL22A1Q8NFW1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 BRI3P1-201ENST00000440440 378 ntBASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 AP005264.6-204ENST00000588436 719 ntBASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL22A1Q8NFW1 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 HNRNPA1P58-201ENST00000403629 610 ntBASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 RPL35P9-201ENST00000446059 350 ntBASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 RGS5-216ENST00000449680 788 ntTSL 3 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 DUX4L50-201ENST00000455245 715 ntBASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 CTBP2P8-201ENST00000422584 1330 ntBASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms