Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 SLC7A15P-201ENST00000424028 1363 ntBASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AC007541.1-201ENST00000570282 1469 ntBASIC13.52□□□□□ -0.25
CPEB3Q8NE35 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AC126365.1-201ENST00000578585 1514 ntBASIC13.52□□□□□ -0.25
CPEB3Q8NE35 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AC148477.4-201ENST00000613430 1793 ntBASIC13.52□□□□□ -0.25
CPEB3Q8NE35 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AC023024.2-201ENST00000623561 1993 ntBASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AC023157.3-201ENST00000619086 2088 ntBASIC13.52□□□□□ -0.25
CPEB3Q8NE35 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AC091951.1-201ENST00000512854 2465 ntBASIC13.52□□□□□ -0.25
CPEB3Q8NE35 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 FAM86LP-201ENST00000478302 853 ntBASIC13.51□□□□□ -0.25
CPEB3Q8NE35 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 AC036164.1-201ENST00000570544 333 ntBASIC13.51□□□□□ -0.25
CPEB3Q8NE35 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 MIR8072-201ENST00000614241 80 ntBASIC13.51□□□□□ -0.25
CPEB3Q8NE35 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPEB3Q8NE35 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 DFFBP1-201ENST00000433250 979 ntBASIC13.5□□□□□ -0.25
CPEB3Q8NE35 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 AL132655.2-201ENST00000596276 594 ntBASIC13.5□□□□□ -0.25
CPEB3Q8NE35 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms