Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 AC079781.5-202ENST00000641784 3743 ntBASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 DOC2GP-202ENST00000514950 1163 ntBASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 TIMM17BP1-201ENST00000545713 516 ntBASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 AC092364.2-202ENST00000597012 1073 ntBASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 OR2I1P-210ENST00000642037 4691 ntBASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 AC127383.1-201ENST00000444697 1800 ntBASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf42Q8N5U0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
C11orf42Q8N5U0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
C11orf42Q8N5U0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
C11orf42Q8N5U0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.9□□□□□ -0.35
C11orf42Q8N5U0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
C11orf42Q8N5U0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
C11orf42Q8N5U0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf42Q8N5U0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf42Q8N5U0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf42Q8N5U0 AC015656.1-201ENST00000624209 3578 ntBASIC12.89□□□□□ -0.35
C11orf42Q8N5U0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.89□□□□□ -0.35
C11orf42Q8N5U0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf42Q8N5U0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.89□□□□□ -0.35
C11orf42Q8N5U0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.89□□□□□ -0.35
C11orf42Q8N5U0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
C11orf42Q8N5U0 SPDYE19P-201ENST00000338590 713 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms