Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 SOCS2P1-201ENST00000417727 557 ntBASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 ARSEP1-201ENST00000420443 635 ntBASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 KRT17P7-201ENST00000451704 1104 ntBASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 MIR6799-201ENST00000620297 69 ntBASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCUBE3Q8IX30 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 AC104457.1-201ENST00000401024 814 ntBASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 AP006294.1-201ENST00000415407 339 ntBASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 GHSR-202ENST00000427970 912 ntBASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 AC004066.1-201ENST00000502488 802 ntBASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 CU639417.3-201ENST00000624240 1404 ntBASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 AP000845.1-201ENST00000581677 2131 ntBASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.18■□□□□ 0.18
SCUBE3Q8IX30 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 MROH4P-201ENST00000431302 1578 ntBASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms