Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 NME2-201ENST00000393183 568 ntTSL 2 BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 BCAS2P2-201ENST00000425064 674 ntBASIC21.17■□□□□ 0.98
UBR1Q8IWV7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 AC007952.4-201ENST00000573866 637 ntBASIC21.17■□□□□ 0.98
UBR1Q8IWV7 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBR1Q8IWV7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 LILRP1-201ENST00000444199 1370 ntBASIC21.16■□□□□ 0.98
UBR1Q8IWV7 AC105250.1-201ENST00000509378 2057 ntBASIC21.16■□□□□ 0.98
UBR1Q8IWV7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 SUPT20HL2-201ENST00000486479 2409 ntBASIC21.16■□□□□ 0.98
UBR1Q8IWV7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBR1Q8IWV7 AC013726.1-201ENST00000563747 2285 ntBASIC21.16■□□□□ 0.98
UBR1Q8IWV7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 HLA-DMA-203ENST00000395305 777 ntBASIC21.15■□□□□ 0.98
UBR1Q8IWV7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 COX20P1-201ENST00000366529 357 ntBASIC21.15■□□□□ 0.98
UBR1Q8IWV7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 HCG27-204ENST00000424675 895 ntTSL 3 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 DPY19L2P5-201ENST00000456300 331 ntBASIC21.15■□□□□ 0.98
UBR1Q8IWV7 MIR4472-1-201ENST00000584349 80 ntBASIC21.15■□□□□ 0.98
UBR1Q8IWV7 DBP-202ENST00000593500 712 ntTSL 2 BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 AL662844.4-201ENST00000606367 2838 ntBASIC21.15■□□□□ 0.98
UBR1Q8IWV7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBR1Q8IWV7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBR1Q8IWV7 KRT8P28-201ENST00000433288 1390 ntBASIC21.14■□□□□ 0.98
UBR1Q8IWV7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 GUSBP10-201ENST00000417412 665 ntBASIC21.14■□□□□ 0.97
UBR1Q8IWV7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 AP003392.6-201ENST00000607709 325 ntBASIC21.14■□□□□ 0.97
UBR1Q8IWV7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC21.14■□□□□ 0.97
UBR1Q8IWV7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
UBR1Q8IWV7 AC007292.2-201ENST00000593524 1812 ntBASIC21.14■□□□□ 0.97
UBR1Q8IWV7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBR1Q8IWV7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBR1Q8IWV7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC21.13■□□□□ 0.97
UBR1Q8IWV7 REXO1L2P-201ENST00000425429 2069 ntBASIC21.13■□□□□ 0.97
UBR1Q8IWV7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UBR1Q8IWV7 Z69890.1-201ENST00000382990 339 ntBASIC21.13■□□□□ 0.97
UBR1Q8IWV7 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UBR1Q8IWV7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 929.7 ms