Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB43Q86YS6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 MIR658-201ENST00000385210 100 ntBASIC14.8□□□□□ -0.04
RAB43Q86YS6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 BOLA2P3-201ENST00000404566 256 ntBASIC14.8□□□□□ -0.04
RAB43Q86YS6 MIR1909-201ENST00000411312 80 ntBASIC14.8□□□□□ -0.04
RAB43Q86YS6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB43Q86YS6 PHKG1P2-201ENST00000457537 863 ntBASIC14.8□□□□□ -0.04
RAB43Q86YS6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB43Q86YS6 SLED1-202ENST00000512051 380 ntBASIC14.8□□□□□ -0.04
RAB43Q86YS6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB43Q86YS6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB43Q86YS6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB43Q86YS6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB43Q86YS6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB43Q86YS6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB43Q86YS6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB43Q86YS6 AC023157.3-201ENST00000619086 2088 ntBASIC14.8□□□□□ -0.04
RAB43Q86YS6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB43Q86YS6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB43Q86YS6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB43Q86YS6 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 ME2P1-201ENST00000426028 1970 ntBASIC14.79□□□□□ -0.04
RAB43Q86YS6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 FAM86LP-201ENST00000478302 853 ntBASIC14.79□□□□□ -0.04
RAB43Q86YS6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 KRT8P22-201ENST00000562317 1415 ntBASIC14.79□□□□□ -0.04
RAB43Q86YS6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 AC010319.3-201ENST00000597028 470 ntBASIC14.79□□□□□ -0.04
RAB43Q86YS6 AL450472.2-201ENST00000603663 1156 ntBASIC14.79□□□□□ -0.04
RAB43Q86YS6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB43Q86YS6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB43Q86YS6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RAB43Q86YS6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB43Q86YS6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB43Q86YS6 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB43Q86YS6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RAB43Q86YS6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB43Q86YS6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB43Q86YS6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB43Q86YS6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB43Q86YS6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB43Q86YS6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB43Q86YS6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB43Q86YS6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB43Q86YS6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB43Q86YS6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms