Protein–RNA interactions for Protein: Q7L099

RUFY3, Protein RUFY3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3Q7L099 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUFY3Q7L099 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.2■□□□□ 0.5
RUFY3Q7L099 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RUFY3Q7L099 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RUFY3Q7L099 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUFY3Q7L099 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUFY3Q7L099 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.2■□□□□ 0.5
RUFY3Q7L099 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
RUFY3Q7L099 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUFY3Q7L099 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RUFY3Q7L099 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RUFY3Q7L099 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RUFY3Q7L099 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RUFY3Q7L099 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUFY3Q7L099 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.2■□□□□ 0.5
RUFY3Q7L099 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 BASP1P1-201ENST00000430708 665 ntBASIC18.19■□□□□ 0.5
RUFY3Q7L099 AC092183.1-201ENST00000469884 875 ntBASIC18.19■□□□□ 0.5
RUFY3Q7L099 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 AC023310.3-201ENST00000557027 670 ntBASIC18.19■□□□□ 0.5
RUFY3Q7L099 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 AC100756.1-201ENST00000562736 682 ntBASIC18.19■□□□□ 0.5
RUFY3Q7L099 AC138749.3-201ENST00000567691 622 ntBASIC18.19■□□□□ 0.5
RUFY3Q7L099 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.19■□□□□ 0.5
RUFY3Q7L099 GPALPP1-207ENST00000611650 899 ntBASIC18.19■□□□□ 0.5
RUFY3Q7L099 AC116165.1-201ENST00000611806 668 ntBASIC18.19■□□□□ 0.5
RUFY3Q7L099 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.19■□□□□ 0.5
RUFY3Q7L099 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.19■□□□□ 0.5
RUFY3Q7L099 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.19■□□□□ 0.5
RUFY3Q7L099 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.19■□□□□ 0.5
RUFY3Q7L099 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUFY3Q7L099 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUFY3Q7L099 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUFY3Q7L099 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RUFY3Q7L099 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUFY3Q7L099 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 NFIC-211ENST00000641145 8399 ntBASIC18.18■□□□□ 0.5
RUFY3Q7L099 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RUFY3Q7L099 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RUFY3Q7L099 DRD5P1-201ENST00000456605 1438 ntBASIC18.18■□□□□ 0.5
RUFY3Q7L099 NORAD-201ENST00000565493 5339 ntBASIC18.18■□□□□ 0.5
RUFY3Q7L099 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 AC004066.1-201ENST00000502488 802 ntBASIC18.18■□□□□ 0.5
RUFY3Q7L099 AC093214.1-201ENST00000511688 1107 ntBASIC18.18■□□□□ 0.5
RUFY3Q7L099 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RUFY3Q7L099 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.18■□□□□ 0.5
RUFY3Q7L099 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms