Protein–RNA interactions for Protein: Q717R9

CYS1, Cystin-1, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYS1Q717R9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYS1Q717R9 AC136759.1-202ENST00000530858 2194 ntBASIC15.32■□□□□ 0.04
CYS1Q717R9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CYS1Q717R9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYS1Q717R9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYS1Q717R9 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CYS1Q717R9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYS1Q717R9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.31■□□□□ 0.04
CYS1Q717R9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.31■□□□□ 0.04
CYS1Q717R9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.31■□□□□ 0.04
CYS1Q717R9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CYS1Q717R9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.31■□□□□ 0.04
CYS1Q717R9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CYS1Q717R9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.31■□□□□ 0.04
CYS1Q717R9 KRT18P13-201ENST00000400056 1290 ntBASIC15.31■□□□□ 0.04
CYS1Q717R9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.31■□□□□ 0.04
CYS1Q717R9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.31■□□□□ 0.04
CYS1Q717R9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.31■□□□□ 0.04
CYS1Q717R9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.31■□□□□ 0.04
CYS1Q717R9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.31■□□□□ 0.04
CYS1Q717R9 AC069120.2-201ENST00000524091 540 ntBASIC15.31■□□□□ 0.04
CYS1Q717R9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.31■□□□□ 0.04
CYS1Q717R9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 AC044860.1-202ENST00000559481 777 ntBASIC15.31■□□□□ 0.04
CYS1Q717R9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.31■□□□□ 0.04
CYS1Q717R9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.31■□□□□ 0.04
CYS1Q717R9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.31■□□□□ 0.04
CYS1Q717R9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CYS1Q717R9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.31■□□□□ 0.04
CYS1Q717R9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CYS1Q717R9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.31■□□□□ 0.04
CYS1Q717R9 AC055811.4-201ENST00000624039 1754 ntBASIC15.31■□□□□ 0.04
CYS1Q717R9 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CYS1Q717R9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYS1Q717R9 AC027601.5-201ENST00000624065 2482 ntBASIC15.31■□□□□ 0.04
CYS1Q717R9 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.3■□□□□ 0.04
CYS1Q717R9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CYS1Q717R9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CYS1Q717R9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.3■□□□□ 0.04
CYS1Q717R9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.3■□□□□ 0.04
CYS1Q717R9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.3■□□□□ 0.04
CYS1Q717R9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.3■□□□□ 0.04
CYS1Q717R9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 MEIS3P1-201ENST00000495167 958 ntBASIC15.3■□□□□ 0.04
CYS1Q717R9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CYS1Q717R9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.3■□□□□ 0.04
CYS1Q717R9 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CYS1Q717R9 AC027369.6-201ENST00000525520 931 ntBASIC15.3■□□□□ 0.04
CYS1Q717R9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CYS1Q717R9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.3■□□□□ 0.04
CYS1Q717R9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.3■□□□□ 0.04
CYS1Q717R9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.3■□□□□ 0.04
CYS1Q717R9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CYS1Q717R9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.3■□□□□ 0.04
CYS1Q717R9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CYS1Q717R9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.3■□□□□ 0.04
CYS1Q717R9 AC097359.2-201ENST00000604992 2389 ntBASIC15.3■□□□□ 0.04
CYS1Q717R9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYS1Q717R9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.3■□□□□ 0.04
CYS1Q717R9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.3■□□□□ 0.04
CYS1Q717R9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms