Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 MIR4741-201ENST00000579822 90 ntBASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 MIR3615-201ENST00000581999 87 ntBASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 AC026691.1-201ENST00000602502 2017 ntBASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 AC092127.1-201ENST00000567093 3455 ntBASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 EIF3FP3-201ENST00000434851 1086 ntBASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 AL591846.1-201ENST00000451736 433 ntBASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 AC103810.3-201ENST00000583567 96 ntBASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC62Q6P9F0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 TPM3P8-201ENST00000330554 643 ntBASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 AC104457.1-201ENST00000401024 814 ntBASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 AC006033.1-201ENST00000440505 426 ntBASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 HOMER2P2-201ENST00000451621 847 ntBASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 SAMD11P1-201ENST00000571429 661 ntBASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 AL118558.3-201ENST00000607414 1079 ntBASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 ENPP7P14-201ENST00000621765 1040 ntBASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 AP003680.1-201ENST00000598970 3660 ntBASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms