Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 AC013726.1-201ENST00000563747 2285 ntBASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 AC004461.1-201ENST00000412461 403 ntBASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 RNA5SP410-201ENST00000516285 106 ntBASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 AC134684.3-201ENST00000641758 218 ntBASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM53Q6P2H8 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 MIR346-201ENST00000362234 95 ntBASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 HLA-H-201ENST00000383620 1096 ntBASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 CNN2P11-201ENST00000429351 262 ntBASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms