Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 KRT8P13-201ENST00000463294 1010 ntBASIC18.24■□□□□ 0.51
PDS5AQ29RF7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 AC099548.2-209ENST00000480264 625 ntBASIC18.24■□□□□ 0.51
PDS5AQ29RF7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 AL022328.3-201ENST00000607943 679 ntBASIC18.24■□□□□ 0.51
PDS5AQ29RF7 AC244093.1-201ENST00000610837 814 ntBASIC18.24■□□□□ 0.51
PDS5AQ29RF7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 FKBP4P6-201ENST00000457486 1332 ntBASIC18.24■□□□□ 0.51
PDS5AQ29RF7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 AC023024.2-201ENST00000623561 1993 ntBASIC18.24■□□□□ 0.51
PDS5AQ29RF7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDS5AQ29RF7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 RN7SKP230-201ENST00000365642 335 ntBASIC18.23■□□□□ 0.51
PDS5AQ29RF7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 TLE1P1-201ENST00000422965 589 ntBASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AL354877.1-201ENST00000424412 413 ntBASIC18.23■□□□□ 0.51
PDS5AQ29RF7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AC104306.2-201ENST00000451877 341 ntBASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AC091804.1-201ENST00000486888 567 ntBASIC18.23■□□□□ 0.51
PDS5AQ29RF7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AC104982.3-201ENST00000581995 514 ntBASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AL118558.3-201ENST00000607414 1079 ntBASIC18.23■□□□□ 0.51
PDS5AQ29RF7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AC018735.1-201ENST00000437208 1502 ntBASIC18.23■□□□□ 0.51
PDS5AQ29RF7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms