Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.38□□□□□ -0.11
CD47Q08722 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CD47Q08722 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD47Q08722 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CD47Q08722 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.37□□□□□ -0.11
CD47Q08722 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 AC107918.4-201ENST00000641966 3141 ntBASIC14.37□□□□□ -0.11
CD47Q08722 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CD47Q08722 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.37□□□□□ -0.11
CD47Q08722 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.37□□□□□ -0.11
CD47Q08722 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.37□□□□□ -0.11
CD47Q08722 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.37□□□□□ -0.11
CD47Q08722 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.37□□□□□ -0.11
CD47Q08722 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CD47Q08722 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.37□□□□□ -0.11
CD47Q08722 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.37□□□□□ -0.11
CD47Q08722 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.37□□□□□ -0.11
CD47Q08722 HTR5BP-201ENST00000430851 1154 ntBASIC14.37□□□□□ -0.11
CD47Q08722 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.37□□□□□ -0.11
CD47Q08722 ALG1L5P-201ENST00000482043 771 ntBASIC14.37□□□□□ -0.11
CD47Q08722 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.37□□□□□ -0.11
CD47Q08722 AC079140.1-201ENST00000508039 487 ntBASIC14.37□□□□□ -0.11
CD47Q08722 KRT8P48-201ENST00000515599 1220 ntBASIC14.37□□□□□ -0.11
CD47Q08722 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
CD47Q08722 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.37□□□□□ -0.11
CD47Q08722 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.37□□□□□ -0.11
CD47Q08722 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.37□□□□□ -0.11
CD47Q08722 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CD47Q08722 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
CD47Q08722 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CD47Q08722 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.37□□□□□ -0.11
CD47Q08722 ST20-AS1-201ENST00000560255 4223 ntBASIC14.37□□□□□ -0.11
CD47Q08722 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CD47Q08722 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.37□□□□□ -0.11
CD47Q08722 AC113367.3-201ENST00000508316 1912 ntBASIC14.37□□□□□ -0.11
CD47Q08722 MBLAC2-202ENST00000514906 1936 ntBASIC14.37□□□□□ -0.11
CD47Q08722 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.37□□□□□ -0.11
CD47Q08722 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD47Q08722 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.36□□□□□ -0.11
CD47Q08722 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.36□□□□□ -0.11
CD47Q08722 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 UXT-AS1-201ENST00000590504 1525 ntBASIC14.36□□□□□ -0.11
CD47Q08722 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD47Q08722 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.36□□□□□ -0.11
CD47Q08722 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.36□□□□□ -0.11
CD47Q08722 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD47Q08722 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD47Q08722 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CD47Q08722 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CD47Q08722 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.36□□□□□ -0.11
CD47Q08722 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.36□□□□□ -0.11
CD47Q08722 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.36□□□□□ -0.11
CD47Q08722 MKNK2P1-201ENST00000437526 628 ntBASIC14.36□□□□□ -0.11
CD47Q08722 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.36□□□□□ -0.11
CD47Q08722 DNAJB3-201ENST00000446806 729 ntBASIC14.36□□□□□ -0.11
CD47Q08722 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.36□□□□□ -0.11
CD47Q08722 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CD47Q08722 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.36□□□□□ -0.11
CD47Q08722 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms