Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.67■□□□□ 0.26
SNRPFP62306 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRPFP62306 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SNRPFP62306 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.66■□□□□ 0.26
SNRPFP62306 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRPFP62306 AC144831.1-201ENST00000573312 2656 ntBASIC16.66■□□□□ 0.26
SNRPFP62306 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRPFP62306 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.66■□□□□ 0.26
SNRPFP62306 AC013726.1-201ENST00000563747 2285 ntBASIC16.66■□□□□ 0.26
SNRPFP62306 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRPFP62306 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SNRPFP62306 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRPFP62306 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.66■□□□□ 0.26
SNRPFP62306 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRPFP62306 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SNRPFP62306 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.66■□□□□ 0.26
SNRPFP62306 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SNRPFP62306 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SNRPFP62306 AC068587.6-202ENST00000641839 5619 ntBASIC16.66■□□□□ 0.26
SNRPFP62306 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRPFP62306 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRPFP62306 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPFP62306 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRPFP62306 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRPFP62306 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SNRPFP62306 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SNRPFP62306 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SNRPFP62306 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRPFP62306 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRPFP62306 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SNRPFP62306 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
SNRPFP62306 RNU1-114P-201ENST00000365297 166 ntBASIC16.65■□□□□ 0.26
SNRPFP62306 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.65■□□□□ 0.26
SNRPFP62306 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SNRPFP62306 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.65■□□□□ 0.26
SNRPFP62306 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRPFP62306 AC093433.1-201ENST00000458048 571 ntBASIC16.65■□□□□ 0.26
SNRPFP62306 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.65■□□□□ 0.26
SNRPFP62306 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.65■□□□□ 0.26
SNRPFP62306 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.65■□□□□ 0.26
SNRPFP62306 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.65■□□□□ 0.26
SNRPFP62306 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SNRPFP62306 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
SNRPFP62306 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRPFP62306 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SNRPFP62306 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 REXO1L5P-201ENST00000622260 2098 ntBASIC16.65■□□□□ 0.26
SNRPFP62306 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPFP62306 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.65■□□□□ 0.26
SNRPFP62306 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.65■□□□□ 0.26
SNRPFP62306 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SNRPFP62306 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms