Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.46■□□□□ 0.07
AP1S1P61966 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
AP1S1P61966 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.46■□□□□ 0.07
AP1S1P61966 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 ACTBP8-201ENST00000403258 1108 ntBASIC15.46■□□□□ 0.07
AP1S1P61966 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.46■□□□□ 0.07
AP1S1P61966 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.46■□□□□ 0.07
AP1S1P61966 USP32P1-208ENST00000506594 1164 ntBASIC15.46■□□□□ 0.07
AP1S1P61966 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
AP1S1P61966 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.46■□□□□ 0.07
AP1S1P61966 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.46■□□□□ 0.07
AP1S1P61966 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.46■□□□□ 0.07
AP1S1P61966 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.46■□□□□ 0.07
AP1S1P61966 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.46■□□□□ 0.07
AP1S1P61966 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
AP1S1P61966 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
AP1S1P61966 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
AP1S1P61966 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
AP1S1P61966 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
AP1S1P61966 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
AP1S1P61966 AC006486.2-201ENST00000624246 2199 ntBASIC15.46■□□□□ 0.07
AP1S1P61966 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
AP1S1P61966 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S1P61966 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.46■□□□□ 0.07
AP1S1P61966 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP1S1P61966 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.46■□□□□ 0.06
AP1S1P61966 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP1S1P61966 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
AP1S1P61966 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
AP1S1P61966 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
AP1S1P61966 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.46■□□□□ 0.06
AP1S1P61966 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
AP1S1P61966 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
AP1S1P61966 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.46■□□□□ 0.06
AP1S1P61966 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.06
AP1S1P61966 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 KRT8P35-201ENST00000483942 1338 ntBASIC15.45■□□□□ 0.06
AP1S1P61966 AC134312.5-201ENST00000568031 1313 ntBASIC15.45■□□□□ 0.06
AP1S1P61966 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
AP1S1P61966 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
AP1S1P61966 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
AP1S1P61966 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 AC005229.1-201ENST00000392885 409 ntBASIC15.45■□□□□ 0.06
AP1S1P61966 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 AL355864.2-201ENST00000447420 863 ntBASIC15.45■□□□□ 0.06
AP1S1P61966 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.45■□□□□ 0.06
AP1S1P61966 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.45■□□□□ 0.06
AP1S1P61966 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
AP1S1P61966 AC233724.13-201ENST00000598383 410 ntBASIC15.45■□□□□ 0.06
AP1S1P61966 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.45■□□□□ 0.06
AP1S1P61966 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
AP1S1P61966 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
AP1S1P61966 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.45■□□□□ 0.06
AP1S1P61966 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.45■□□□□ 0.06
AP1S1P61966 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S1P61966 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
AP1S1P61966 HYMAI-201ENST00000635591 3347 ntBASIC15.45■□□□□ 0.06
AP1S1P61966 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S1P61966 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.44■□□□□ 0.06
AP1S1P61966 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms