Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H6P61129 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
ZC3H6P61129 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.27■□□□□ 0.84
ZC3H6P61129 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC20.27■□□□□ 0.84
ZC3H6P61129 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC20.27■□□□□ 0.84
ZC3H6P61129 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ZC3H6P61129 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC20.27■□□□□ 0.84
ZC3H6P61129 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC20.27■□□□□ 0.84
ZC3H6P61129 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC20.27■□□□□ 0.84
ZC3H6P61129 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 VDAC1P1-201ENST00000439229 848 ntBASIC20.27■□□□□ 0.84
ZC3H6P61129 HLA-J-204ENST00000495278 958 ntBASIC20.27■□□□□ 0.84
ZC3H6P61129 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC20.27■□□□□ 0.84
ZC3H6P61129 AC009779.1-201ENST00000551138 283 ntBASIC20.27■□□□□ 0.84
ZC3H6P61129 MIR4754-201ENST00000582477 89 ntBASIC20.27■□□□□ 0.84
ZC3H6P61129 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
ZC3H6P61129 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.27■□□□□ 0.84
ZC3H6P61129 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.27■□□□□ 0.84
ZC3H6P61129 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ZC3H6P61129 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.27■□□□□ 0.84
ZC3H6P61129 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H6P61129 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZC3H6P61129 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
ZC3H6P61129 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ZC3H6P61129 TBC1D3J-201ENST00000620719 1426 ntBASIC20.27■□□□□ 0.83
ZC3H6P61129 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.26■□□□□ 0.83
ZC3H6P61129 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
ZC3H6P61129 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ZC3H6P61129 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ZC3H6P61129 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC20.26■□□□□ 0.83
ZC3H6P61129 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC20.26■□□□□ 0.83
ZC3H6P61129 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20.26■□□□□ 0.83
ZC3H6P61129 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC20.26■□□□□ 0.83
ZC3H6P61129 AC008805.1-201ENST00000590892 364 ntBASIC20.26■□□□□ 0.83
ZC3H6P61129 AC092171.5-201ENST00000608012 942 ntBASIC20.26■□□□□ 0.83
ZC3H6P61129 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.26■□□□□ 0.83
ZC3H6P61129 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
ZC3H6P61129 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H6P61129 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.26■□□□□ 0.83
ZC3H6P61129 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ZC3H6P61129 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ZC3H6P61129 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC20.25■□□□□ 0.83
ZC3H6P61129 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.25■□□□□ 0.83
ZC3H6P61129 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ZC3H6P61129 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ZC3H6P61129 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC20.25■□□□□ 0.83
ZC3H6P61129 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC20.25■□□□□ 0.83
ZC3H6P61129 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC20.25■□□□□ 0.83
ZC3H6P61129 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC20.25■□□□□ 0.83
ZC3H6P61129 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
ZC3H6P61129 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 AC011840.2-201ENST00000563063 1520 ntBASIC20.25■□□□□ 0.83
ZC3H6P61129 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ZC3H6P61129 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ZC3H6P61129 MBLAC2-202ENST00000514906 1936 ntBASIC20.25■□□□□ 0.83
ZC3H6P61129 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ZC3H6P61129 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms