Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S2P59780 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S2P59780 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S2P59780 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
AP3S2P59780 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S2P59780 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.28□□□□□ -0.28
AP3S2P59780 GHSR-202ENST00000427970 912 ntBASIC13.28□□□□□ -0.28
AP3S2P59780 PHKG1P2-201ENST00000457537 863 ntBASIC13.28□□□□□ -0.28
AP3S2P59780 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.28□□□□□ -0.28
AP3S2P59780 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.28□□□□□ -0.28
AP3S2P59780 PRYP6-201ENST00000514804 343 ntBASIC13.28□□□□□ -0.28
AP3S2P59780 IGHV3-65-201ENST00000523210 341 ntBASIC13.28□□□□□ -0.28
AP3S2P59780 SART3-203ENST00000546611 1184 ntBASIC13.28□□□□□ -0.28
AP3S2P59780 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.28□□□□□ -0.28
AP3S2P59780 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.28□□□□□ -0.28
AP3S2P59780 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.28□□□□□ -0.28
AP3S2P59780 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 AL355877.3-201ENST00000622820 899 ntBASIC13.28□□□□□ -0.28
AP3S2P59780 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S2P59780 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
AP3S2P59780 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 AC018442.1-201ENST00000421439 2061 ntBASIC13.28□□□□□ -0.28
AP3S2P59780 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S2P59780 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
AP3S2P59780 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S2P59780 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S2P59780 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.27□□□□□ -0.28
AP3S2P59780 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.27□□□□□ -0.28
AP3S2P59780 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S2P59780 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.27□□□□□ -0.28
AP3S2P59780 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.27□□□□□ -0.28
AP3S2P59780 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S2P59780 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S2P59780 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.27□□□□□ -0.28
AP3S2P59780 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S2P59780 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.27□□□□□ -0.28
AP3S2P59780 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
AP3S2P59780 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S2P59780 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S2P59780 AP001267.2-201ENST00000532619 2086 ntBASIC13.27□□□□□ -0.28
AP3S2P59780 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S2P59780 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.27□□□□□ -0.28
AP3S2P59780 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S2P59780 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S2P59780 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
AP3S2P59780 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S2P59780 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.27□□□□□ -0.29
AP3S2P59780 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.27□□□□□ -0.29
AP3S2P59780 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S2P59780 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.27□□□□□ -0.29
AP3S2P59780 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.27□□□□□ -0.29
AP3S2P59780 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
AP3S2P59780 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.27□□□□□ -0.29
AP3S2P59780 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.27□□□□□ -0.29
AP3S2P59780 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
AP3S2P59780 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.27□□□□□ -0.29
AP3S2P59780 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S2P59780 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.27□□□□□ -0.29
AP3S2P59780 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S2P59780 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
AP3S2P59780 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
AP3S2P59780 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.27□□□□□ -0.29
AP3S2P59780 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S2P59780 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
AP3S2P59780 CICP11-201ENST00000434745 2827 ntBASIC13.27□□□□□ -0.29
AP3S2P59780 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S2P59780 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.27□□□□□ -0.29
AP3S2P59780 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
AP3S2P59780 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S2P59780 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S2P59780 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.27□□□□□ -0.29
AP3S2P59780 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms