Protein–RNA interactions for Protein: P55199

ELL, RNA polymerase II elongation factor ELL, humanhuman

Predicted RBP Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELLP55199 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ELLP55199 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.64□□□□□ -0.39
ELLP55199 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ELLP55199 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 WASH6P-202ENST00000359512 1437 ntBASIC12.64□□□□□ -0.39
ELLP55199 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.64□□□□□ -0.39
ELLP55199 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ELLP55199 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.64□□□□□ -0.39
ELLP55199 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ELLP55199 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
ELLP55199 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.64□□□□□ -0.39
ELLP55199 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
ELLP55199 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ELLP55199 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ELLP55199 AL078644.1-201ENST00000609881 752 ntBASIC12.64□□□□□ -0.39
ELLP55199 C20orf181-201ENST00000623918 480 ntBASIC12.64□□□□□ -0.39
ELLP55199 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
ELLP55199 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.64□□□□□ -0.39
ELLP55199 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.64□□□□□ -0.39
ELLP55199 AP001282.1-201ENST00000531301 1499 ntBASIC12.64□□□□□ -0.39
ELLP55199 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ELLP55199 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.64□□□□□ -0.39
ELLP55199 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ELLP55199 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.64□□□□□ -0.39
ELLP55199 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ELLP55199 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ELLP55199 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.63□□□□□ -0.39
ELLP55199 AC041040.2-201ENST00000622926 2899 ntBASIC12.63□□□□□ -0.39
ELLP55199 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
ELLP55199 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ELLP55199 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
ELLP55199 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ELLP55199 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ELLP55199 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ELLP55199 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.63□□□□□ -0.39
ELLP55199 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ELLP55199 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ELLP55199 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
ELLP55199 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.63□□□□□ -0.39
ELLP55199 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ELLP55199 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ELLP55199 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 AC023274.1-201ENST00000418278 595 ntBASIC12.63□□□□□ -0.39
ELLP55199 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.63□□□□□ -0.39
ELLP55199 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.63□□□□□ -0.39
ELLP55199 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.63□□□□□ -0.39
ELLP55199 RARRES2P8-201ENST00000566335 367 ntBASIC12.63□□□□□ -0.39
ELLP55199 AL671883.3-201ENST00000603274 991 ntBASIC12.63□□□□□ -0.39
ELLP55199 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.63□□□□□ -0.39
ELLP55199 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.63□□□□□ -0.39
ELLP55199 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.63□□□□□ -0.39
ELLP55199 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ELLP55199 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.63□□□□□ -0.39
ELLP55199 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
ELLP55199 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.63□□□□□ -0.39
ELLP55199 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms