Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC25A1P53007 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.69□□□□□ -0.22
SLC25A1P53007 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC25A1P53007 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.69□□□□□ -0.22
SLC25A1P53007 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC25A1P53007 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC25A1P53007 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC25A1P53007 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SLC25A1P53007 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.69□□□□□ -0.22
SLC25A1P53007 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SLC25A1P53007 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SLC25A1P53007 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC25A1P53007 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC25A1P53007 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
SLC25A1P53007 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC25A1P53007 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SLC25A1P53007 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC25A1P53007 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.68□□□□□ -0.22
SLC25A1P53007 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.68□□□□□ -0.22
SLC25A1P53007 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.68□□□□□ -0.22
SLC25A1P53007 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC25A1P53007 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC25A1P53007 ZNF890P-202ENST00000530367 1156 ntBASIC13.68□□□□□ -0.22
SLC25A1P53007 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SLC25A1P53007 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.68□□□□□ -0.22
SLC25A1P53007 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.68□□□□□ -0.22
SLC25A1P53007 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC25A1P53007 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SLC25A1P53007 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC25A1P53007 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC25A1P53007 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
SLC25A1P53007 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SLC25A1P53007 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC25A1P53007 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
SLC25A1P53007 AC126755.1-201ENST00000525846 6405 ntBASIC13.67□□□□□ -0.22
SLC25A1P53007 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC25A1P53007 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC25A1P53007 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC25A1P53007 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SLC25A1P53007 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SLC25A1P53007 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC25A1P53007 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC25A1P53007 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC25A1P53007 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SLC25A1P53007 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC25A1P53007 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC25A1P53007 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
SLC25A1P53007 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC25A1P53007 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.67□□□□□ -0.22
SLC25A1P53007 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SLC25A1P53007 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.67□□□□□ -0.22
SLC25A1P53007 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.67□□□□□ -0.22
SLC25A1P53007 AC092865.5-201ENST00000545435 363 ntBASIC13.67□□□□□ -0.22
SLC25A1P53007 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SLC25A1P53007 SNHG9-202ENST00000564014 471 ntBASIC13.67□□□□□ -0.22
SLC25A1P53007 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC25A1P53007 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC25A1P53007 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
SLC25A1P53007 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC25A1P53007 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.67□□□□□ -0.22
SLC25A1P53007 AC004461.2-201ENST00000629517 803 ntBASIC13.67□□□□□ -0.22
SLC25A1P53007 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC25A1P53007 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC25A1P53007 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC25A1P53007 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC25A1P53007 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms