Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 AC092933.1-201ENST00000393644 945 ntBASIC17.34■□□□□ 0.37
USP11P51784 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
USP11P51784 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.34■□□□□ 0.37
USP11P51784 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.34■□□□□ 0.37
USP11P51784 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.34■□□□□ 0.37
USP11P51784 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
USP11P51784 AL355864.2-201ENST00000447420 863 ntBASIC17.34■□□□□ 0.37
USP11P51784 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.34■□□□□ 0.37
USP11P51784 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.34■□□□□ 0.37
USP11P51784 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.34■□□□□ 0.37
USP11P51784 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.34■□□□□ 0.37
USP11P51784 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.34■□□□□ 0.37
USP11P51784 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.34■□□□□ 0.37
USP11P51784 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
USP11P51784 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.34■□□□□ 0.37
USP11P51784 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.34■□□□□ 0.37
USP11P51784 AC023157.3-201ENST00000619086 2088 ntBASIC17.34■□□□□ 0.37
USP11P51784 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 DBET-201ENST00000630918 3363 ntBASIC17.34■□□□□ 0.37
USP11P51784 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP11P51784 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.33■□□□□ 0.37
USP11P51784 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
USP11P51784 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
USP11P51784 REXO1L5P-201ENST00000622260 2098 ntBASIC17.33■□□□□ 0.37
USP11P51784 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP11P51784 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
USP11P51784 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.33■□□□□ 0.37
USP11P51784 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
USP11P51784 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
USP11P51784 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP11P51784 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP11P51784 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
USP11P51784 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP11P51784 AC018665.1-201ENST00000622927 1362 ntBASIC17.33■□□□□ 0.36
USP11P51784 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP11P51784 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.33■□□□□ 0.36
USP11P51784 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.33■□□□□ 0.36
USP11P51784 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
USP11P51784 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
USP11P51784 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
USP11P51784 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP11P51784 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.33■□□□□ 0.36
USP11P51784 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP11P51784 AC022616.1-201ENST00000518688 554 ntBASIC17.33■□□□□ 0.36
USP11P51784 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.33■□□□□ 0.36
USP11P51784 DUX4L47-201ENST00000566374 394 ntBASIC17.33■□□□□ 0.36
USP11P51784 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP11P51784 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP11P51784 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
USP11P51784 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP11P51784 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.33■□□□□ 0.36
USP11P51784 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP11P51784 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP11P51784 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP11P51784 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP11P51784 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.32■□□□□ 0.36
USP11P51784 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
USP11P51784 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
USP11P51784 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.32■□□□□ 0.36
USP11P51784 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.32■□□□□ 0.36
USP11P51784 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.32■□□□□ 0.36
USP11P51784 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.32■□□□□ 0.36
USP11P51784 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 BCRP2-202ENST00000447763 634 ntBASIC17.32■□□□□ 0.36
USP11P51784 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.32■□□□□ 0.36
USP11P51784 BCRP6-201ENST00000510112 632 ntBASIC17.32■□□□□ 0.36
USP11P51784 BCRP7-201ENST00000511549 544 ntBASIC17.32■□□□□ 0.36
USP11P51784 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.32■□□□□ 0.36
USP11P51784 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.32■□□□□ 0.36
USP11P51784 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.32■□□□□ 0.36
USP11P51784 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.32■□□□□ 0.36
USP11P51784 AC145423.3-201ENST00000615987 467 ntBASIC17.32■□□□□ 0.36
USP11P51784 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.32■□□□□ 0.36
USP11P51784 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.32■□□□□ 0.36
USP11P51784 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.32■□□□□ 0.36
USP11P51784 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms