Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRE11P49959 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.07■□□□□ 0.48
MRE11P49959 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRE11P49959 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MRE11P49959 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRE11P49959 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.07■□□□□ 0.48
MRE11P49959 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC18.07■□□□□ 0.48
MRE11P49959 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MRE11P49959 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.07■□□□□ 0.48
MRE11P49959 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRE11P49959 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
MRE11P49959 ATP5G2P4-201ENST00000442175 420 ntBASIC18.07■□□□□ 0.48
MRE11P49959 ABCD1P5-201ENST00000445663 754 ntBASIC18.07■□□□□ 0.48
MRE11P49959 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.07■□□□□ 0.48
MRE11P49959 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MRE11P49959 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.07■□□□□ 0.48
MRE11P49959 AP005018.1-201ENST00000525475 301 ntBASIC18.07■□□□□ 0.48
MRE11P49959 CR383656.12-201ENST00000549567 513 ntBASIC18.07■□□□□ 0.48
MRE11P49959 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.07■□□□□ 0.48
MRE11P49959 AC093520.2-201ENST00000561830 333 ntBASIC18.07■□□□□ 0.48
MRE11P49959 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.07■□□□□ 0.48
MRE11P49959 RN7SL204P-201ENST00000582831 262 ntBASIC18.07■□□□□ 0.48
MRE11P49959 AL390955.2-201ENST00000603032 514 ntBASIC18.07■□□□□ 0.48
MRE11P49959 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
MRE11P49959 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
MRE11P49959 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC18.07■□□□□ 0.48
MRE11P49959 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC18.07■□□□□ 0.48
MRE11P49959 AC113367.3-201ENST00000508316 1912 ntBASIC18.07■□□□□ 0.48
MRE11P49959 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MRE11P49959 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MRE11P49959 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MRE11P49959 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.07■□□□□ 0.48
MRE11P49959 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRE11P49959 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC18.07■□□□□ 0.48
MRE11P49959 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRE11P49959 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRE11P49959 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MRE11P49959 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 AC152010.1-201ENST00000415779 2006 ntBASIC18.06■□□□□ 0.48
MRE11P49959 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
MRE11P49959 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.06■□□□□ 0.48
MRE11P49959 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.06■□□□□ 0.48
MRE11P49959 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
MRE11P49959 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MRE11P49959 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC18.06■□□□□ 0.48
MRE11P49959 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 TFAMP1-201ENST00000412727 736 ntBASIC18.06■□□□□ 0.48
MRE11P49959 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.06■□□□□ 0.48
MRE11P49959 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.06■□□□□ 0.48
MRE11P49959 AC005593.1-201ENST00000624894 515 ntBASIC18.06■□□□□ 0.48
MRE11P49959 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 AC011474.4-201ENST00000623523 2076 ntBASIC18.06■□□□□ 0.48
MRE11P49959 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC18.06■□□□□ 0.48
MRE11P49959 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.06■□□□□ 0.48
MRE11P49959 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRE11P49959 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MRE11P49959 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRE11P49959 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRE11P49959 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
MRE11P49959 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRE11P49959 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRE11P49959 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRE11P49959 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRE11P49959 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRE11P49959 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRE11P49959 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC18.05■□□□□ 0.48
MRE11P49959 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRE11P49959 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC18.05■□□□□ 0.48
MRE11P49959 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MRE11P49959 AC134407.2-201ENST00000625089 1978 ntBASIC18.05■□□□□ 0.48
MRE11P49959 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRE11P49959 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.05■□□□□ 0.48
MRE11P49959 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRE11P49959 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
MRE11P49959 LAGE3P1-201ENST00000425356 484 ntBASIC18.05■□□□□ 0.48
MRE11P49959 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.05■□□□□ 0.48
MRE11P49959 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.05■□□□□ 0.48
MRE11P49959 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.05■□□□□ 0.48
MRE11P49959 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MRE11P49959 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.05■□□□□ 0.48
MRE11P49959 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.05■□□□□ 0.48
MRE11P49959 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.05■□□□□ 0.48
MRE11P49959 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.05■□□□□ 0.48
MRE11P49959 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.05■□□□□ 0.48
MRE11P49959 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms