Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SLC1A1P43005 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC1A1P43005 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC1A1P43005 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SLC1A1P43005 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.13■□□□□ 0.17
SLC1A1P43005 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SLC1A1P43005 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC1A1P43005 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC1A1P43005 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC1A1P43005 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC1A1P43005 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC1A1P43005 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC1A1P43005 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC1A1P43005 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC1A1P43005 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC1A1P43005 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC1A1P43005 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC1A1P43005 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC1A1P43005 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC1A1P43005 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC1A1P43005 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC1A1P43005 AC005089.1-201ENST00000619486 2241 ntBASIC16.13■□□□□ 0.17
SLC1A1P43005 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SLC1A1P43005 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SLC1A1P43005 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A1P43005 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SLC1A1P43005 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SLC1A1P43005 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC1A1P43005 AC092580.3-201ENST00000430932 139 ntBASIC16.12■□□□□ 0.17
SLC1A1P43005 AC114501.2-201ENST00000439631 535 ntBASIC16.12■□□□□ 0.17
SLC1A1P43005 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC1A1P43005 AC097493.3-201ENST00000509725 367 ntBASIC16.12■□□□□ 0.17
SLC1A1P43005 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.12■□□□□ 0.17
SLC1A1P43005 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A1P43005 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.12■□□□□ 0.17
SLC1A1P43005 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC1A1P43005 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SLC1A1P43005 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SLC1A1P43005 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SLC1A1P43005 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC1A1P43005 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC1A1P43005 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A1P43005 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A1P43005 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.12■□□□□ 0.17
SLC1A1P43005 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC1A1P43005 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A1P43005 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SLC1A1P43005 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A1P43005 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A1P43005 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A1P43005 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SLC1A1P43005 BTBD7P1-201ENST00000447253 1453 ntBASIC16.11■□□□□ 0.17
SLC1A1P43005 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A1P43005 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A1P43005 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A1P43005 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A1P43005 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A1P43005 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A1P43005 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A1P43005 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A1P43005 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A1P43005 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A1P43005 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A1P43005 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SLC1A1P43005 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.11■□□□□ 0.17
SLC1A1P43005 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A1P43005 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
SLC1A1P43005 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.11■□□□□ 0.17
SLC1A1P43005 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A1P43005 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.11■□□□□ 0.17
SLC1A1P43005 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SLC1A1P43005 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC1A1P43005 AL590560.3-201ENST00000623350 461 ntBASIC16.11■□□□□ 0.17
SLC1A1P43005 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC1A1P43005 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A1P43005 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms