Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CD40LGP29965 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.72□□□□□ -0.21
CD40LGP29965 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.72□□□□□ -0.21
CD40LGP29965 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.72□□□□□ -0.21
CD40LGP29965 AC132008.2-207ENST00000454517 770 ntBASIC13.72□□□□□ -0.21
CD40LGP29965 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 AC073592.4-201ENST00000623827 446 ntBASIC13.72□□□□□ -0.21
CD40LGP29965 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 AC055811.4-201ENST00000624039 1754 ntBASIC13.72□□□□□ -0.21
CD40LGP29965 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.72□□□□□ -0.21
CD40LGP29965 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.72□□□□□ -0.21
CD40LGP29965 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CD40LGP29965 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD40LGP29965 AC018442.1-201ENST00000421439 2061 ntBASIC13.71□□□□□ -0.21
CD40LGP29965 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CD40LGP29965 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.71□□□□□ -0.21
CD40LGP29965 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
CD40LGP29965 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CD40LGP29965 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.71□□□□□ -0.21
CD40LGP29965 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.71□□□□□ -0.21
CD40LGP29965 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CD40LGP29965 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.71□□□□□ -0.21
CD40LGP29965 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 AC005412.3-201ENST00000580309 715 ntBASIC13.71□□□□□ -0.21
CD40LGP29965 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.71□□□□□ -0.21
CD40LGP29965 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.71□□□□□ -0.21
CD40LGP29965 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.71□□□□□ -0.21
CD40LGP29965 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.71□□□□□ -0.21
CD40LGP29965 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.71□□□□□ -0.21
CD40LGP29965 AF228730.7-201ENST00000641842 219 ntBASIC13.71□□□□□ -0.21
CD40LGP29965 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.71□□□□□ -0.21
CD40LGP29965 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD40LGP29965 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.71□□□□□ -0.21
CD40LGP29965 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.71□□□□□ -0.21
CD40LGP29965 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD40LGP29965 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms