Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.24■□□□□ 0.03
VARSP26640 NME2P1-201ENST00000426182 414 ntBASIC15.24■□□□□ 0.03
VARSP26640 AC092580.3-201ENST00000430932 139 ntBASIC15.24■□□□□ 0.03
VARSP26640 TARDBPP1-201ENST00000442013 1203 ntBASIC15.24■□□□□ 0.03
VARSP26640 KRT17P7-201ENST00000451704 1104 ntBASIC15.24■□□□□ 0.03
VARSP26640 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.24■□□□□ 0.03
VARSP26640 AC027369.6-201ENST00000525520 931 ntBASIC15.24■□□□□ 0.03
VARSP26640 AL512361.1-201ENST00000554200 418 ntBASIC15.24■□□□□ 0.03
VARSP26640 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VARSP26640 AL662799.1-202ENST00000614205 422 ntBASIC15.24■□□□□ 0.03
VARSP26640 AC025048.6-201ENST00000634326 1161 ntBASIC15.24■□□□□ 0.03
VARSP26640 AL033527.5-202ENST00000641632 1098 ntBASIC15.24■□□□□ 0.03
VARSP26640 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.24■□□□□ 0.03
VARSP26640 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.24■□□□□ 0.03
VARSP26640 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VARSP26640 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VARSP26640 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VARSP26640 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.24■□□□□ 0.03
VARSP26640 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.24■□□□□ 0.03
VARSP26640 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.23■□□□□ 0.03
VARSP26640 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.23■□□□□ 0.03
VARSP26640 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
VARSP26640 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 MIR661-201ENST00000384842 89 ntBASIC15.23■□□□□ 0.03
VARSP26640 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.23■□□□□ 0.03
VARSP26640 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.23■□□□□ 0.03
VARSP26640 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.23■□□□□ 0.03
VARSP26640 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
VARSP26640 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.23■□□□□ 0.03
VARSP26640 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.23■□□□□ 0.03
VARSP26640 SPDYE22P-201ENST00000582158 798 ntBASIC15.23■□□□□ 0.03
VARSP26640 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.23■□□□□ 0.03
VARSP26640 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.23■□□□□ 0.03
VARSP26640 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.23■□□□□ 0.03
VARSP26640 AL008721.1-201ENST00000609964 604 ntBASIC15.23■□□□□ 0.03
VARSP26640 MIR6069-201ENST00000620069 79 ntBASIC15.23■□□□□ 0.03
VARSP26640 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.23■□□□□ 0.03
VARSP26640 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
VARSP26640 CU639417.3-201ENST00000624240 1404 ntBASIC15.23■□□□□ 0.03
VARSP26640 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.23■□□□□ 0.03
VARSP26640 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
VARSP26640 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
VARSP26640 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.23■□□□□ 0.03
VARSP26640 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARSP26640 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.22■□□□□ 0.03
VARSP26640 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.22■□□□□ 0.03
VARSP26640 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms