Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.19■□□□□ 0.02
CDH3P22223 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH3P22223 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CDH3P22223 DGCR5-201ENST00000399539 862 ntBASIC15.19■□□□□ 0.02
CDH3P22223 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.19■□□□□ 0.02
CDH3P22223 AP006294.1-201ENST00000415407 339 ntBASIC15.19■□□□□ 0.02
CDH3P22223 MYCLP2-201ENST00000449268 967 ntBASIC15.19■□□□□ 0.02
CDH3P22223 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH3P22223 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH3P22223 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.19■□□□□ 0.02
CDH3P22223 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH3P22223 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.19■□□□□ 0.02
CDH3P22223 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.19■□□□□ 0.02
CDH3P22223 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.19■□□□□ 0.02
CDH3P22223 RRP7BP-205ENST00000566851 833 ntBASIC15.19■□□□□ 0.02
CDH3P22223 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.19■□□□□ 0.02
CDH3P22223 AC036164.1-201ENST00000570544 333 ntBASIC15.19■□□□□ 0.02
CDH3P22223 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH3P22223 AC093726.1-201ENST00000608064 963 ntBASIC15.19■□□□□ 0.02
CDH3P22223 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH3P22223 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH3P22223 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH3P22223 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDH3P22223 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH3P22223 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CDH3P22223 AC063926.2-201ENST00000623766 1308 ntBASIC15.18■□□□□ 0.02
CDH3P22223 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH3P22223 AC023157.3-201ENST00000619086 2088 ntBASIC15.18■□□□□ 0.02
CDH3P22223 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
CDH3P22223 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH3P22223 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDH3P22223 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDH3P22223 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH3P22223 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH3P22223 AC098614.1-201ENST00000368528 745 ntBASIC15.18■□□□□ 0.02
CDH3P22223 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDH3P22223 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH3P22223 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.18■□□□□ 0.02
CDH3P22223 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH3P22223 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH3P22223 WASH4P-201ENST00000564273 1246 ntBASIC15.18■□□□□ 0.02
CDH3P22223 AC097359.3-201ENST00000603982 1210 ntBASIC15.18■□□□□ 0.02
CDH3P22223 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH3P22223 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CDH3P22223 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH3P22223 AC138969.3-201ENST00000546612 1459 ntBASIC15.18■□□□□ 0.02
CDH3P22223 AC138932.2-201ENST00000548268 1459 ntBASIC15.18■□□□□ 0.02
CDH3P22223 AC126755.4-201ENST00000549796 1459 ntBASIC15.18■□□□□ 0.02
CDH3P22223 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH3P22223 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH3P22223 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH3P22223 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH3P22223 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH3P22223 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH3P22223 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDH3P22223 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CDH3P22223 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH3P22223 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH3P22223 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH3P22223 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CDH3P22223 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 AC015656.1-201ENST00000624209 3578 ntBASIC15.17■□□□□ 0.02
CDH3P22223 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDH3P22223 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH3P22223 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH3P22223 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 CLK3P2-201ENST00000427566 1453 ntBASIC15.17■□□□□ 0.02
CDH3P22223 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CDH3P22223 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH3P22223 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH3P22223 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH3P22223 KRT18P64-201ENST00000434946 1219 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms