Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 AC005840.4-201ENST00000541242 2494 ntBASIC14.36□□□□□ -0.11
TNFRSF1BP20333 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 AC005829.1-201ENST00000570002 483 ntBASIC14.36□□□□□ -0.11
TNFRSF1BP20333 MIR4453-201ENST00000584019 89 ntBASIC14.36□□□□□ -0.11
TNFRSF1BP20333 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 KRT8P12-202ENST00000472924 1397 ntBASIC14.35□□□□□ -0.11
TNFRSF1BP20333 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.35□□□□□ -0.11
TNFRSF1BP20333 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFRSF1BP20333 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms