Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.92■□□□□ 0.3
SMPD1P17405 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMPD1P17405 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.92■□□□□ 0.3
SMPD1P17405 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.92■□□□□ 0.3
SMPD1P17405 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SMPD1P17405 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.92■□□□□ 0.3
SMPD1P17405 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SMPD1P17405 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 ACTG1P2-201ENST00000415776 1125 ntBASIC16.92■□□□□ 0.3
SMPD1P17405 AL008707.1-201ENST00000422498 534 ntBASIC16.92■□□□□ 0.3
SMPD1P17405 ACTG1P11-201ENST00000425411 1125 ntBASIC16.92■□□□□ 0.3
SMPD1P17405 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.92■□□□□ 0.3
SMPD1P17405 AC013355.1-201ENST00000562625 723 ntBASIC16.92■□□□□ 0.3
SMPD1P17405 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.92■□□□□ 0.3
SMPD1P17405 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SMPD1P17405 AC026740.1-201ENST00000607068 791 ntBASIC16.92■□□□□ 0.3
SMPD1P17405 AC002472.3-201ENST00000640124 621 ntBASIC16.92■□□□□ 0.3
SMPD1P17405 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SMPD1P17405 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 AC004899.1-201ENST00000424687 1714 ntBASIC16.92■□□□□ 0.3
SMPD1P17405 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 AL118508.1-201ENST00000613502 2345 ntBASIC16.92■□□□□ 0.3
SMPD1P17405 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.92■□□□□ 0.3
SMPD1P17405 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMPD1P17405 REXO1L4P-201ENST00000605109 1937 ntBASIC16.92■□□□□ 0.3
SMPD1P17405 AC092850.2-201ENST00000623821 2697 ntBASIC16.92■□□□□ 0.3
SMPD1P17405 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMPD1P17405 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMPD1P17405 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 AC008132.1-202ENST00000342005 1389 ntBASIC16.91■□□□□ 0.3
SMPD1P17405 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.91■□□□□ 0.3
SMPD1P17405 AC084018.2-201ENST00000613093 2607 ntBASIC16.91■□□□□ 0.3
SMPD1P17405 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
SMPD1P17405 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMPD1P17405 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.91■□□□□ 0.3
SMPD1P17405 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.91■□□□□ 0.3
SMPD1P17405 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.91■□□□□ 0.3
SMPD1P17405 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.91■□□□□ 0.3
SMPD1P17405 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.91■□□□□ 0.3
SMPD1P17405 Z97180.1-201ENST00000445173 988 ntBASIC16.91■□□□□ 0.3
SMPD1P17405 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.91■□□□□ 0.3
SMPD1P17405 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SMPD1P17405 RN7SL574P-201ENST00000581512 297 ntBASIC16.91■□□□□ 0.3
SMPD1P17405 RN7SL163P-201ENST00000583100 276 ntBASIC16.91■□□□□ 0.3
SMPD1P17405 AC009955.4-201ENST00000597192 544 ntBASIC16.91■□□□□ 0.3
SMPD1P17405 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.91■□□□□ 0.3
SMPD1P17405 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 AC090616.6-203ENST00000579186 1945 ntBASIC16.91■□□□□ 0.3
SMPD1P17405 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMPD1P17405 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.91■□□□□ 0.3
SMPD1P17405 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.91■□□□□ 0.3
SMPD1P17405 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.91■□□□□ 0.3
SMPD1P17405 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.91■□□□□ 0.3
SMPD1P17405 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.91■□□□□ 0.3
SMPD1P17405 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMPD1P17405 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMPD1P17405 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SMPD1P17405 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.9■□□□□ 0.3
SMPD1P17405 AC020910.5-201ENST00000623668 1865 ntBASIC16.9■□□□□ 0.3
SMPD1P17405 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SMPD1P17405 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.9■□□□□ 0.3
SMPD1P17405 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMPD1P17405 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
SMPD1P17405 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMPD1P17405 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMPD1P17405 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.9■□□□□ 0.3
SMPD1P17405 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.9■□□□□ 0.3
SMPD1P17405 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.9■□□□□ 0.3
SMPD1P17405 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMPD1P17405 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.9■□□□□ 0.3
SMPD1P17405 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.9■□□□□ 0.3
SMPD1P17405 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms